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update the cv modal inference proxy server with optimization #6

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msk_admin merged 1 commits from poc_1_3 into main 2026-07-15 16:25:26 +00:00
Conversation 1 Commits 1 Files Changed 51 +2067 -245
DTJ-Tran commented 2026-07-15 16:25:13 +00:00
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Summary by CodeRabbit

  • New Features

    • Added asynchronous batch processing for computer-vision analysis, with job submission, progress polling, retries, and improved concurrency.
    • Added clearer model installation states, including resume and stalled-download feedback.
    • Improved clinical chat streaming for multi-part responses and preserved per-segment conversation output.
    • Added centralized frontend configuration for feature flags and service endpoints.

  • Bug Fixes

    • Improved timeout handling, resumable downloads, cache invalidation, and inference startup reliability.

  • Documentation

    • Added pilot proposal and CI/CD architecture guidance.
<!-- This is an auto-generated comment: release notes by coderabbit.ai --> ## Summary by CodeRabbit * **New Features** * Added asynchronous batch processing for computer-vision analysis, with job submission, progress polling, retries, and improved concurrency. * Added clearer model installation states, including resume and stalled-download feedback. * Improved clinical chat streaming for multi-part responses and preserved per-segment conversation output. * Added centralized frontend configuration for feature flags and service endpoints. * **Bug Fixes** * Improved timeout handling, resumable downloads, cache invalidation, and inference startup reliability. * **Documentation** * Added pilot proposal and CI/CD architecture guidance. <!-- end of auto-generated comment: release notes by coderabbit.ai -->
coderabbitai[bot] commented 2026-07-15 16:25:44 +00:00 (Migrated from github.com)
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The pull request is closed.

ℹ️ Recent review info
⚙️ Run configuration

Configuration used: defaults

Review profile: CHILL

Plan: Pro

Run ID: 49efd638-5734-4822-ab59-890a0403488a

📥 Commits

Reviewing files that changed from the base of the PR and between 3435cfefa0 and 1f5e71b46a.

⛔ Files ignored due to path filters (3)
  • workspace/sprint_1_2/PRODUCT_VISUALIZATION/home_screen.png is excluded by !**/*.png
  • workspace/sprint_1_2/PRODUCT_VISUALIZATION/interactive_diagnosis.png is excluded by !**/*.png
  • workspace/sprint_1_2/PRODUCT_VISUALIZATION/the_diagnosis_screen.png is excluded by !**/*.png
📒 Files selected for processing (48)
  • .gitignore
  • proj_level_reading/PROPOSAL/VKIST_MSK_PILOT_PROPOSAL.md
  • workspace/sprint_1_2/CODEBASE/backend/cv_inference_server.py
  • workspace/sprint_1_2/CODEBASE/backend/implementation/adapters/triton_adapter.py
  • workspace/sprint_1_2/CODEBASE/backend/implementation/tasks/__init__.py
  • workspace/sprint_1_2/CODEBASE/backend/implementation/tasks/cv_tasks.py
  • workspace/sprint_1_2/CODEBASE/backend/logging/logging_config.py
  • workspace/sprint_1_2/CODEBASE/backend/routers/cv_inference.py
  • workspace/sprint_1_2/CODEBASE/backend/routers/run_cv_inference.sh
  • workspace/sprint_1_2/CODEBASE/backend/services/celery_app.py
  • workspace/sprint_1_2/CODEBASE/backend/services/cv_celery_service.py
  • workspace/sprint_1_2/CODEBASE/backend/services/cv_inference_service.py
  • workspace/sprint_1_2/CODEBASE/backend/services/triton_runtime_service.py
  • workspace/sprint_1_2/CODEBASE/backend/services/triton_warmup.py
  • workspace/sprint_1_2/CODEBASE/backend/start_celery_workers.sh
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/.gitignore
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/config/frontend.config.yaml
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/molecules/CalibrationControls.tsx
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/molecules/ClinicalChatPanel.tsx
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/molecules/ClinicalChatThought.tsx
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/molecules/RecordingModeSelector.tsx
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/molecules/SeverityBadge.tsx
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/organisms/DiagnosticCanvas.tsx
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/organisms/ReviewDiagnosticSessionPanel.tsx
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/organisms/SideNavBar.tsx
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/shells/WorkspaceShell.tsx
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/data/calibrationMetricHelp.ts
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/data/calibrationTiers.ts
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/hooks/useClinicalChat.ts
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/hooks/useSegmentationOverlay.ts
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/lib/cvAnalyzeApi.ts
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/lib/llm/clinicalChatConfig.ts
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/lib/llm/llmWorkerClient.ts
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/lib/llm/modelLoadProgress.ts
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/lib/llm/opfsModelStore.ts
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/lib/llm/runClinicalChatTurn.ts
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/pages/ClinicalWorkspacePage.tsx
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/vite-env.d.ts
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/src/workers/llm.worker.ts
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/tsconfig.json
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/tsconfig.tsbuildinfo
  • workspace/sprint_1_2/CODEBASE/frontend/implementation/vite.config.ts
  • workspace/sprint_1_2/CODEBASE/infra/implementation/cicd/jenkin_run.sh
  • workspace/sprint_1_2/CODEBASE/infra/implementation/cicd/suggested_cicd_pipeline.md
  • workspace/sprint_1_2/CODEBASE/infra/implementation/cicd/the_pipeline.md
  • workspace/sprint_1_2/CODEBASE/infra/implementation/triton_run/modal_triton.py
  • workspace/sprint_1_2/CODEBASE/infra/implementation/triton_run/run.sh
  • workspace/sprint_1_2/CODEBASE/requirements.txt
📝 Walkthrough

Walkthrough

This change adds a Celery-backed CV inference pipeline, concurrent Triton execution, segmented clinical chat streaming, resumable model-install handling, frontend configuration, UI updates, deployment changes, and pilot/CI/CD documentation.

Changes

CV inference pipeline

Layer / File(s) Summary
Celery batch backend
backend/services/*, backend/implementation/tasks/*, backend/routers/cv_inference.py, backend/logging/*		 Adds Redis/Celery configuration, chunk tasks, batch submission and polling routes, structured statuses, logging, retries, and cache-enabled legacy analysis.
Concurrent Triton execution
backend/implementation/adapters/*, backend/services/triton_*, backend/services/cv_inference_service.py, backend/cv_inference_server.py		 Adds persistent HTTP sessions, retry changes, timeout-bounded warmup, adapter cleanup, semaphore-limited batch execution, and background startup warmup.
Frontend Celery integration
frontend/implementation/src/lib/cvAnalyzeApi.ts, src/hooks/useSegmentationOverlay.ts, src/components/organisms/DiagnosticCanvas.tsx, src/pages/ClinicalWorkspacePage.tsx		 Adds typed Celery submission/status APIs, polling and cache population, retry invalidation, and an environment-controlled Celery fetch path.
Inference operations
backend/start_celery_workers.sh, backend/routers/run_cv_inference.sh, frontend/implementation/vite.config.ts, requirements.txt		 Adds local service-management and server scripts and updates runtime/build configuration for the inference pipeline.

Clinical chat workflow

Layer / File(s) Summary
Segmented response streaming
frontend/implementation/src/lib/llm/*, src/workers/llm.worker.ts, src/hooks/useClinicalChat.ts		 Propagates segment boundaries and renders continuation generations in separate assistant bubbles with per-segment streaming and finalization.
Resumable model installation
frontend/implementation/src/lib/llm/modelLoadProgress.ts, opfsModelStore.ts, src/hooks/useClinicalChat.ts		 Adds download probe timeouts, timeout retry classification, partial-file resume detection, revised progress mapping, and a byte-progress stall watchdog.
Chat loading and thought presentation
frontend/implementation/src/components/molecules/ClinicalChatPanel.tsx, ClinicalChatThought.tsx, src/lib/llm/clinicalChatConfig.ts		 Adds stalled installation visuals and copy, keeps thought content mounted while collapsed, and changes environment flag parsing.

Product and infrastructure artifacts

Layer / File(s) Summary
Pilot and CI/CD documentation
proj_level_reading/PROPOSAL/*, infra/implementation/cicd/*		 Adds the pilot proposal and CI/CD architecture documentation.
Frontend configuration and presentation
frontend/implementation/config/*, src/components/*, src/data/*, src/components/shells/*, src/vite-env.d.ts		 Adds YAML-driven frontend settings and updates labels, calibration copy, styles, responsive layout, and environment declarations.
Deployment and repository configuration
.gitignore, infra/implementation/triton_run/*, requirements.txt		 Expands ignored artifacts, mounts the model bucket locally for Triton, updates the Modal deployment command, and changes Python dependencies.

Estimated code review effort: 5 (Critical) | ~120 minutes

Sequence Diagram(s)

sequenceDiagram
  participant Frontend
  participant FastAPI
  participant Redis
  participant CeleryWorker
  participant Triton
  Frontend->>FastAPI: Submit image batch
  FastAPI->>Redis: Enqueue grouped CV chunks
  Redis->>CeleryWorker: Deliver chunk tasks
  CeleryWorker->>Triton: Run model inference
  Frontend->>FastAPI: Poll job status
  FastAPI->>Redis: Read grouped results
  Redis-->>Frontend: Return pending or completed results
✨ Finishing Touches
📝 Generate docstrings
  • Create stacked PR
  • Commit on current branch
🧪 Generate unit tests (beta)
  • Create PR with unit tests
  • Commit unit tests in branch poc_1_3

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<!-- This is an auto-generated comment: summarize by coderabbit.ai --> <!-- review_stack_entry_start --> [![Review Change Stack](https://storage.googleapis.com/coderabbit_public_assets/review-stack-in-coderabbit-ui.svg)](https://app.coderabbit.ai/change-stack/DTJ-Tran/Lumina-MSK/pull/6?utm_source=github_walkthrough&utm_medium=github&utm_campaign=change_stack) <!-- review_stack_entry_end --> <!-- This is an auto-generated comment: failure by coderabbit.ai --> > [!CAUTION] > ## Review failed > > The pull request is closed. <!-- end of auto-generated comment: failure by coderabbit.ai --> <details> <summary>ℹ️ Recent review info</summary> <details> <summary>⚙️ Run configuration</summary> **Configuration used**: defaults **Review profile**: CHILL **Plan**: Pro **Run ID**: `49efd638-5734-4822-ab59-890a0403488a` </details> <details> <summary>📥 Commits</summary> Reviewing files that changed from the base of the PR and between 3435cfefa03f2aa8c99e3f3e8c5e3fc713ae7685 and 1f5e71b46a2565b8f736c8bee3187de672619a61. </details> <details> <summary>⛔ Files ignored due to path filters (3)</summary> * `workspace/sprint_1_2/PRODUCT_VISUALIZATION/home_screen.png` is excluded by `!**/*.png` * `workspace/sprint_1_2/PRODUCT_VISUALIZATION/interactive_diagnosis.png` is excluded by `!**/*.png` * `workspace/sprint_1_2/PRODUCT_VISUALIZATION/the_diagnosis_screen.png` is excluded by `!**/*.png` </details> <details> <summary>📒 Files selected for processing (48)</summary> * `.gitignore` * `proj_level_reading/PROPOSAL/VKIST_MSK_PILOT_PROPOSAL.md` * `workspace/sprint_1_2/CODEBASE/backend/cv_inference_server.py` * `workspace/sprint_1_2/CODEBASE/backend/implementation/adapters/triton_adapter.py` * `workspace/sprint_1_2/CODEBASE/backend/implementation/tasks/__init__.py` * `workspace/sprint_1_2/CODEBASE/backend/implementation/tasks/cv_tasks.py` * `workspace/sprint_1_2/CODEBASE/backend/logging/logging_config.py` * `workspace/sprint_1_2/CODEBASE/backend/routers/cv_inference.py` * `workspace/sprint_1_2/CODEBASE/backend/routers/run_cv_inference.sh` * `workspace/sprint_1_2/CODEBASE/backend/services/celery_app.py` * `workspace/sprint_1_2/CODEBASE/backend/services/cv_celery_service.py` * `workspace/sprint_1_2/CODEBASE/backend/services/cv_inference_service.py` * `workspace/sprint_1_2/CODEBASE/backend/services/triton_runtime_service.py` * `workspace/sprint_1_2/CODEBASE/backend/services/triton_warmup.py` * `workspace/sprint_1_2/CODEBASE/backend/start_celery_workers.sh` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/.gitignore` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/config/frontend.config.yaml` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/molecules/CalibrationControls.tsx` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/molecules/ClinicalChatPanel.tsx` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/molecules/ClinicalChatThought.tsx` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/molecules/RecordingModeSelector.tsx` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/molecules/SeverityBadge.tsx` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/organisms/DiagnosticCanvas.tsx` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/organisms/ReviewDiagnosticSessionPanel.tsx` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/organisms/SideNavBar.tsx` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/components/shells/WorkspaceShell.tsx` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/data/calibrationMetricHelp.ts` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/data/calibrationTiers.ts` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/hooks/useClinicalChat.ts` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/hooks/useSegmentationOverlay.ts` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/lib/cvAnalyzeApi.ts` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/lib/llm/clinicalChatConfig.ts` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/lib/llm/llmWorkerClient.ts` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/lib/llm/modelLoadProgress.ts` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/lib/llm/opfsModelStore.ts` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/lib/llm/runClinicalChatTurn.ts` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/pages/ClinicalWorkspacePage.tsx` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/vite-env.d.ts` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/src/workers/llm.worker.ts` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/tsconfig.json` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/tsconfig.tsbuildinfo` * `workspace/sprint_1_2/CODEBASE/frontend/implementation/vite.config.ts` * `workspace/sprint_1_2/CODEBASE/infra/implementation/cicd/jenkin_run.sh` * `workspace/sprint_1_2/CODEBASE/infra/implementation/cicd/suggested_cicd_pipeline.md` * `workspace/sprint_1_2/CODEBASE/infra/implementation/cicd/the_pipeline.md` * `workspace/sprint_1_2/CODEBASE/infra/implementation/triton_run/modal_triton.py` * `workspace/sprint_1_2/CODEBASE/infra/implementation/triton_run/run.sh` * `workspace/sprint_1_2/CODEBASE/requirements.txt` </details> </details> --- <!-- walkthrough_start --> <details> <summary>📝 Walkthrough</summary> ## Walkthrough This change adds a Celery-backed CV inference pipeline, concurrent Triton execution, segmented clinical chat streaming, resumable model-install handling, frontend configuration, UI updates, deployment changes, and pilot/CI/CD documentation. ### Changes **CV inference pipeline** |Layer / File(s)|Summary| |---|---| |**Celery batch backend** <br> `backend/services/*`, `backend/implementation/tasks/*`, `backend/routers/cv_inference.py`, `backend/logging/*`|Adds Redis/Celery configuration, chunk tasks, batch submission and polling routes, structured statuses, logging, retries, and cache-enabled legacy analysis.| |**Concurrent Triton execution** <br> `backend/implementation/adapters/*`, `backend/services/triton_*`, `backend/services/cv_inference_service.py`, `backend/cv_inference_server.py`|Adds persistent HTTP sessions, retry changes, timeout-bounded warmup, adapter cleanup, semaphore-limited batch execution, and background startup warmup.| |**Frontend Celery integration** <br> `frontend/implementation/src/lib/cvAnalyzeApi.ts`, `src/hooks/useSegmentationOverlay.ts`, `src/components/organisms/DiagnosticCanvas.tsx`, `src/pages/ClinicalWorkspacePage.tsx`|Adds typed Celery submission/status APIs, polling and cache population, retry invalidation, and an environment-controlled Celery fetch path.| |**Inference operations** <br> `backend/start_celery_workers.sh`, `backend/routers/run_cv_inference.sh`, `frontend/implementation/vite.config.ts`, `requirements.txt`|Adds local service-management and server scripts and updates runtime/build configuration for the inference pipeline.| **Clinical chat workflow** |Layer / File(s)|Summary| |---|---| |**Segmented response streaming** <br> `frontend/implementation/src/lib/llm/*`, `src/workers/llm.worker.ts`, `src/hooks/useClinicalChat.ts`|Propagates segment boundaries and renders continuation generations in separate assistant bubbles with per-segment streaming and finalization.| |**Resumable model installation** <br> `frontend/implementation/src/lib/llm/modelLoadProgress.ts`, `opfsModelStore.ts`, `src/hooks/useClinicalChat.ts`|Adds download probe timeouts, timeout retry classification, partial-file resume detection, revised progress mapping, and a byte-progress stall watchdog.| |**Chat loading and thought presentation** <br> `frontend/implementation/src/components/molecules/ClinicalChatPanel.tsx`, `ClinicalChatThought.tsx`, `src/lib/llm/clinicalChatConfig.ts`|Adds stalled installation visuals and copy, keeps thought content mounted while collapsed, and changes environment flag parsing.| **Product and infrastructure artifacts** |Layer / File(s)|Summary| |---|---| |**Pilot and CI/CD documentation** <br> `proj_level_reading/PROPOSAL/*`, `infra/implementation/cicd/*`|Adds the pilot proposal and CI/CD architecture documentation.| |**Frontend configuration and presentation** <br> `frontend/implementation/config/*`, `src/components/*`, `src/data/*`, `src/components/shells/*`, `src/vite-env.d.ts`|Adds YAML-driven frontend settings and updates labels, calibration copy, styles, responsive layout, and environment declarations.| |**Deployment and repository configuration** <br> `.gitignore`, `infra/implementation/triton_run/*`, `requirements.txt`|Expands ignored artifacts, mounts the model bucket locally for Triton, updates the Modal deployment command, and changes Python dependencies.| **Estimated code review effort:** 5 (Critical) | ~120 minutes ### Sequence Diagram(s) ```mermaid sequenceDiagram participant Frontend participant FastAPI participant Redis participant CeleryWorker participant Triton Frontend->>FastAPI: Submit image batch FastAPI->>Redis: Enqueue grouped CV chunks Redis->>CeleryWorker: Deliver chunk tasks CeleryWorker->>Triton: Run model inference Frontend->>FastAPI: Poll job status FastAPI->>Redis: Read grouped results Redis-->>Frontend: Return pending or completed results ``` </details> <!-- walkthrough_end --> <!-- finishing_touch_checkbox_start --> <details> <summary>✨ Finishing Touches</summary> <details> <summary>📝 Generate docstrings</summary> - [ ] <!-- {"checkboxId": "7962f53c-55bc-4827-bfbf-6a18da830691"} --> Create stacked PR - [ ] <!-- {"checkboxId": "3e1879ae-f29b-4d0d-8e06-d12b7ba33d98"} --> Commit on current branch </details> <details> <summary>🧪 Generate unit tests (beta)</summary> - [ ] <!-- {"checkboxId": "f47ac10b-58cc-4372-a567-0e02b2c3d479", "radioGroupId": "utg-output-choice-group-unknown_comment_id"} --> Create PR with unit tests - [ ] <!-- {"checkboxId": "6ba7b810-9dad-11d1-80b4-00c04fd430c8", "radioGroupId": "utg-output-choice-group-unknown_comment_id"} --> Commit unit tests in branch `poc_1_3` </details> </details> <!-- finishing_touch_checkbox_end --> <!-- tips_start --> --- Thanks for using [CodeRabbit](https://coderabbit.ai?utm_source=oss&utm_medium=github&utm_campaign=DTJ-Tran/Lumina-MSK&utm_content=6)! 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Reference: msk_admin/Lumina-MSK#6
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